Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.92■■□□□ 1.42
COL15A1P39059 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.92■■□□□ 1.42
COL15A1P39059 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL15A1P39059 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.91■■□□□ 1.42
COL15A1P39059 TSPY22P-201ENST00000427496 604 ntBASIC23.91■■□□□ 1.42
COL15A1P39059 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 NUS1P1-201ENST00000446295 882 ntBASIC23.91■■□□□ 1.42
COL15A1P39059 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.91■■□□□ 1.42
COL15A1P39059 RNF126P1-202ENST00000569893 925 ntBASIC23.91■■□□□ 1.42
COL15A1P39059 AL732292.2-201ENST00000609649 430 ntBASIC23.91■■□□□ 1.42
COL15A1P39059 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
COL15A1P39059 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
COL15A1P39059 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL15A1P39059 AP000347.1-202ENST00000435868 847 ntBASIC23.91■■□□□ 1.42
COL15A1P39059 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.91■■□□□ 1.42
COL15A1P39059 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.91■■□□□ 1.42
COL15A1P39059 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.91■■□□□ 1.42
COL15A1P39059 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.91■■□□□ 1.42
COL15A1P39059 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL15A1P39059 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.9■■□□□ 1.42
COL15A1P39059 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 KRT18P1-202ENST00000452408 1331 ntBASIC23.9■■□□□ 1.42
COL15A1P39059 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.9■■□□□ 1.42
COL15A1P39059 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COL15A1P39059 DRAXINP1-201ENST00000437611 948 ntBASIC23.9■■□□□ 1.42
COL15A1P39059 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.9■■□□□ 1.42
COL15A1P39059 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL15A1P39059 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL15A1P39059 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.89■■□□□ 1.42
COL15A1P39059 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL15A1P39059 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL15A1P39059 AFG3L1P-217ENST00000557444 2447 ntBASIC23.89■■□□□ 1.41
COL15A1P39059 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
COL15A1P39059 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL15A1P39059 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.89■■□□□ 1.41
COL15A1P39059 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
COL15A1P39059 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.89■■□□□ 1.41
COL15A1P39059 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
COL15A1P39059 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL15A1P39059 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL15A1P39059 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.88■■□□□ 1.41
COL15A1P39059 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
COL15A1P39059 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.88■■□□□ 1.41
COL15A1P39059 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.88■■□□□ 1.41
COL15A1P39059 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.88■■□□□ 1.41
COL15A1P39059 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
COL15A1P39059 AL031008.1-201ENST00000619963 541 ntBASIC23.88■■□□□ 1.41
COL15A1P39059 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL15A1P39059 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.88■■□□□ 1.41
COL15A1P39059 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
COL15A1P39059 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.87■■□□□ 1.41
COL15A1P39059 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 TEX21P-204ENST00000641479 1693 ntBASIC23.87■■□□□ 1.41
COL15A1P39059 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.87■■□□□ 1.41
COL15A1P39059 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.87■■□□□ 1.41
COL15A1P39059 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.87■■□□□ 1.41
COL15A1P39059 TSPY19P-201ENST00000418461 509 ntBASIC23.87■■□□□ 1.41
COL15A1P39059 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.87■■□□□ 1.41
COL15A1P39059 TSPY18P-201ENST00000441642 509 ntBASIC23.87■■□□□ 1.41
COL15A1P39059 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.87■■□□□ 1.41
COL15A1P39059 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms