Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
RFC1P35251 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RFC1P35251 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 AL512353.2-201ENST00000448759 1962 ntBASIC19.87■□□□□ 0.77
RFC1P35251 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.87■□□□□ 0.77
RFC1P35251 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.87■□□□□ 0.77
RFC1P35251 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC1P35251 REXO1L10P-201ENST00000615707 1290 ntBASIC19.87■□□□□ 0.77
RFC1P35251 REXO1L12P-201ENST00000622156 912 ntBASIC19.87■□□□□ 0.77
RFC1P35251 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RFC1P35251 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFC1P35251 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFC1P35251 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC1P35251 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RFC1P35251 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RFC1P35251 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFC1P35251 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC1P35251 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC1P35251 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC1P35251 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFC1P35251 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFC1P35251 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RFC1P35251 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC1P35251 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC1P35251 AC026471.5-201ENST00000615068 467 ntBASIC19.86■□□□□ 0.77
RFC1P35251 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC1P35251 AC083906.6-201ENST00000641366 219 ntBASIC19.86■□□□□ 0.77
RFC1P35251 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC1P35251 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFC1P35251 AC093525.10-201ENST00000625130 1569 ntBASIC19.86■□□□□ 0.77
RFC1P35251 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC1P35251 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC1P35251 AL138781.2-201ENST00000617896 1843 ntBASIC19.86■□□□□ 0.77
RFC1P35251 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.85■□□□□ 0.77
RFC1P35251 AL355355.2-201ENST00000442321 338 ntBASIC19.85■□□□□ 0.77
RFC1P35251 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC1P35251 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RFC1P35251 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC1P35251 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
RFC1P35251 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC1P35251 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC1P35251 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
RFC1P35251 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC1P35251 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFC1P35251 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFC1P35251 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC1P35251 MIR718-201ENST00000390190 70 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms