Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC6A4P31645 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A4P31645 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A4P31645 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 NEK4P2-201ENST00000580004 1012 ntBASIC19.36■□□□□ 0.69
SLC6A4P31645 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A4P31645 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A4P31645 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SLC6A4P31645 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC6A4P31645 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SLC6A4P31645 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC6A4P31645 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC6A4P31645 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC6A4P31645 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 AC140113.3-201ENST00000605663 199 ntBASIC19.35■□□□□ 0.69
SLC6A4P31645 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC6A4P31645 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A4P31645 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A4P31645 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A4P31645 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A4P31645 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC6A4P31645 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A4P31645 GCSHP2-201ENST00000560971 527 ntBASIC19.34■□□□□ 0.69
SLC6A4P31645 AC068587.9-201ENST00000641814 219 ntBASIC19.34■□□□□ 0.69
SLC6A4P31645 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC6A4P31645 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A4P31645 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A4P31645 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC6A4P31645 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC6A4P31645 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC6A4P31645 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A4P31645 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SLC6A4P31645 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A4P31645 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC6A4P31645 FAM8A6P-201ENST00000407496 1135 ntBASIC19.33■□□□□ 0.68
SLC6A4P31645 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms