Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.6
HTR1BP28222 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HTR1BP28222 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HTR1BP28222 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.77■□□□□ 0.6
HTR1BP28222 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.77■□□□□ 0.6
HTR1BP28222 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.77■□□□□ 0.6
HTR1BP28222 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.77■□□□□ 0.6
HTR1BP28222 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1BP28222 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.77■□□□□ 0.6
HTR1BP28222 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1BP28222 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.77■□□□□ 0.6
HTR1BP28222 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1BP28222 AC087388.1-201ENST00000571370 1112 ntBASIC18.77■□□□□ 0.6
HTR1BP28222 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 NTF6B-201ENST00000591913 560 ntBASIC18.77■□□□□ 0.6
HTR1BP28222 AC140113.3-201ENST00000605663 199 ntBASIC18.77■□□□□ 0.6
HTR1BP28222 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HTR1BP28222 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HTR1BP28222 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1BP28222 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.77■□□□□ 0.6
HTR1BP28222 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTR1BP28222 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTR1BP28222 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.77■□□□□ 0.59
HTR1BP28222 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.77■□□□□ 0.59
HTR1BP28222 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTR1BP28222 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
HTR1BP28222 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.76■□□□□ 0.59
HTR1BP28222 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.76■□□□□ 0.59
HTR1BP28222 Z82202.1-201ENST00000623446 1880 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.76■□□□□ 0.59
HTR1BP28222 AC092647.4-201ENST00000457211 535 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 YBX1P2-201ENST00000489612 999 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 AC022616.7-201ENST00000525383 220 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.76■□□□□ 0.59
HTR1BP28222 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.76■□□□□ 0.59
HTR1BP28222 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HTR1BP28222 TREX1-205ENST00000625293 1783 ntBASIC18.76■□□□□ 0.59
HTR1BP28222 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
HTR1BP28222 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.75■□□□□ 0.59
HTR1BP28222 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.75■□□□□ 0.59
HTR1BP28222 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 AC063952.2-201ENST00000498792 1227 ntBASIC18.75■□□□□ 0.59
HTR1BP28222 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 WWOX-216ENST00000569818 525 ntBASIC18.75■□□□□ 0.59
HTR1BP28222 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.75■□□□□ 0.59
HTR1BP28222 AC026471.1-201ENST00000564629 3026 ntBASIC18.75■□□□□ 0.59
HTR1BP28222 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HTR1BP28222 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms