Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 SLC25A6P5-201ENST00000435663 894 ntBASIC15.09■□□□□ 0.01
ATP6V0CP27449 TERF1P5-201ENST00000477545 1207 ntBASIC15.09■□□□□ 0.01
ATP6V0CP27449 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 MYCNOS-205ENST00000641950 531 ntBASIC15.09■□□□□ 0.01
ATP6V0CP27449 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AC084018.2-201ENST00000613093 2607 ntBASIC15.09■□□□□ 0.01
ATP6V0CP27449 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AC004854.2-201ENST00000608450 1441 ntBASIC15.09■□□□□ 0.01
ATP6V0CP27449 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATP6V0CP27449 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 AC135776.1-201ENST00000319817 2481 ntBASIC15.08■□□□□ 0.01
ATP6V0CP27449 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.08■□□□□ 0.01
ATP6V0CP27449 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.08■□□□□ 0.01
ATP6V0CP27449 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.08■□□□□ 0.01
ATP6V0CP27449 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ATP6V0CP27449 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.08■□□□□ 0
ATP6V0CP27449 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.08■□□□□ 0
ATP6V0CP27449 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.08■□□□□ 0
ATP6V0CP27449 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
ATP6V0CP27449 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
ATP6V0CP27449 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.08■□□□□ 0
ATP6V0CP27449 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.08■□□□□ 0
ATP6V0CP27449 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATP6V0CP27449 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ATP6V0CP27449 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.07■□□□□ 0
ATP6V0CP27449 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ATP6V0CP27449 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.07■□□□□ 0
ATP6V0CP27449 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATP6V0CP27449 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.07■□□□□ 0
ATP6V0CP27449 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
ATP6V0CP27449 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.07■□□□□ 0
ATP6V0CP27449 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ATP6V0CP27449 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATP6V0CP27449 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.07■□□□□ 0
ATP6V0CP27449 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ATP6V0CP27449 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATP6V0CP27449 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms