Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTPN3P26045 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPN3P26045 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 RNF165-205ENST00000588679 2904 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 TSPY7P-201ENST00000431358 1114 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 MFAP1P1-201ENST00000442257 1255 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN3P26045 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.23■□□□□ 0.67
PTPN3P26045 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN3P26045 AP003071.4-201ENST00000562276 1284 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 SLC25A1P4-201ENST00000567977 778 ntBASIC19.23■□□□□ 0.67
PTPN3P26045 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN3P26045 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PTPN3P26045 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN3P26045 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPN3P26045 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN3P26045 WIZP1-201ENST00000531444 2299 ntBASIC19.22■□□□□ 0.67
PTPN3P26045 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTPN3P26045 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 MTMR9LP-203ENST00000426597 1545 ntBASIC19.22■□□□□ 0.67
PTPN3P26045 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.22■□□□□ 0.67
PTPN3P26045 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 AC097488.1-201ENST00000507834 756 ntBASIC19.22■□□□□ 0.67
PTPN3P26045 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPN3P26045 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPN3P26045 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN3P26045 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN3P26045 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN3P26045 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN3P26045 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN3P26045 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN3P26045 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPN3P26045 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN3P26045 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN3P26045 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN3P26045 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN3P26045 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PTPN3P26045 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTPN3P26045 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN3P26045 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN3P26045 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN3P26045 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN3P26045 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN3P26045 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN3P26045 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN3P26045 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN3P26045 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms