Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
CD40P25942 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CD40P25942 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.27■□□□□ 0.2
CD40P25942 MYC-208ENST00000641036 567 ntBASIC16.27■□□□□ 0.2
CD40P25942 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD40P25942 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD40P25942 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CD40P25942 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD40P25942 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CD40P25942 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD40P25942 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.27■□□□□ 0.19
CD40P25942 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.27■□□□□ 0.19
CD40P25942 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
CD40P25942 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CD40P25942 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CD40P25942 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CD40P25942 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CD40P25942 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 AL512353.2-201ENST00000448759 1962 ntBASIC16.26■□□□□ 0.19
CD40P25942 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.26■□□□□ 0.19
CD40P25942 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
CD40P25942 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 AL359075.1-203ENST00000462729 1002 ntBASIC16.26■□□□□ 0.19
CD40P25942 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.26■□□□□ 0.19
CD40P25942 GCSHP2-201ENST00000560971 527 ntBASIC16.26■□□□□ 0.19
CD40P25942 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CD40P25942 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD40P25942 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 AC007952.6-201ENST00000573168 2673 ntBASIC16.26■□□□□ 0.19
CD40P25942 AC003957.1-201ENST00000625108 2673 ntBASIC16.26■□□□□ 0.19
CD40P25942 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.26■□□□□ 0.19
CD40P25942 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD40P25942 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD40P25942 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.25■□□□□ 0.19
CD40P25942 AL031133.1-201ENST00000406807 723 ntBASIC16.25■□□□□ 0.19
CD40P25942 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.25■□□□□ 0.19
CD40P25942 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CD40P25942 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.25■□□□□ 0.19
CD40P25942 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.25■□□□□ 0.19
CD40P25942 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CD40P25942 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CD40P25942 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.25■□□□□ 0.19
CD40P25942 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD40P25942 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 RCC2P3-201ENST00000418112 1537 ntBASIC16.24■□□□□ 0.19
CD40P25942 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CD40P25942 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.24■□□□□ 0.19
CD40P25942 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD40P25942 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CD40P25942 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD40P25942 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms