Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 FAM8A6P-201ENST00000407496 1135 ntBASIC15.92■□□□□ 0.14
COL8A2P25067 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.92■□□□□ 0.14
COL8A2P25067 LINC01238-205ENST00000567549 1107 ntBASIC15.92■□□□□ 0.14
COL8A2P25067 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.92■□□□□ 0.14
COL8A2P25067 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
COL8A2P25067 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL8A2P25067 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
COL8A2P25067 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.92■□□□□ 0.14
COL8A2P25067 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COL8A2P25067 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.91■□□□□ 0.14
COL8A2P25067 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 AC092647.4-201ENST00000457211 535 ntBASIC15.91■□□□□ 0.14
COL8A2P25067 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.91■□□□□ 0.14
COL8A2P25067 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.91■□□□□ 0.14
COL8A2P25067 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.91■□□□□ 0.14
COL8A2P25067 CR769767.2-201ENST00000622735 460 ntBASIC15.91■□□□□ 0.14
COL8A2P25067 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 GPAT2P1-201ENST00000444924 1672 ntBASIC15.91■□□□□ 0.14
COL8A2P25067 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COL8A2P25067 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.91■□□□□ 0.14
COL8A2P25067 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.91■□□□□ 0.14
COL8A2P25067 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL8A2P25067 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
COL8A2P25067 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
COL8A2P25067 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.9■□□□□ 0.14
COL8A2P25067 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.9■□□□□ 0.14
COL8A2P25067 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 AL023284.2-201ENST00000405850 579 ntBASIC15.9■□□□□ 0.14
COL8A2P25067 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.9■□□□□ 0.14
COL8A2P25067 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.9■□□□□ 0.14
COL8A2P25067 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.9■□□□□ 0.14
COL8A2P25067 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.9■□□□□ 0.14
COL8A2P25067 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
COL8A2P25067 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.9■□□□□ 0.14
COL8A2P25067 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL8A2P25067 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms