Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.49■□□□□ 0.39
NR4A1P22736 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.49■□□□□ 0.39
NR4A1P22736 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NR4A1P22736 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
NR4A1P22736 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.49■□□□□ 0.39
NR4A1P22736 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.49■□□□□ 0.39
NR4A1P22736 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
NR4A1P22736 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NR4A1P22736 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR4A1P22736 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR4A1P22736 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NR4A1P22736 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 HLA-B-256ENST00000639848 1089 ntBASIC17.48■□□□□ 0.39
NR4A1P22736 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.48■□□□□ 0.39
NR4A1P22736 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 Z98044.1-201ENST00000632503 1764 ntBASIC17.48■□□□□ 0.39
NR4A1P22736 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.48■□□□□ 0.39
NR4A1P22736 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NR4A1P22736 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.47■□□□□ 0.39
NR4A1P22736 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NR4A1P22736 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.47■□□□□ 0.39
NR4A1P22736 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.47■□□□□ 0.39
NR4A1P22736 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.47■□□□□ 0.39
NR4A1P22736 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.47■□□□□ 0.39
NR4A1P22736 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
NR4A1P22736 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR4A1P22736 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NR4A1P22736 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NR4A1P22736 AC009053.2-201ENST00000563701 2365 ntBASIC17.46■□□□□ 0.39
NR4A1P22736 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A1P22736 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A1P22736 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.46■□□□□ 0.39
NR4A1P22736 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A1P22736 AC060766.5-201ENST00000590539 871 ntBASIC17.46■□□□□ 0.39
NR4A1P22736 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A1P22736 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR4A1P22736 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A1P22736 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms