Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 HEIH-201ENST00000623091 1652 ntBASIC19.18■□□□□ 0.66
NFKB1P19838 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKB1P19838 MFAP1P1-201ENST00000442257 1255 ntBASIC19.18■□□□□ 0.66
NFKB1P19838 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKB1P19838 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.18■□□□□ 0.66
NFKB1P19838 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.18■□□□□ 0.66
NFKB1P19838 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKB1P19838 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKB1P19838 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKB1P19838 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
NFKB1P19838 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.17■□□□□ 0.66
NFKB1P19838 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 AC097488.1-201ENST00000507834 756 ntBASIC19.17■□□□□ 0.66
NFKB1P19838 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.17■□□□□ 0.66
NFKB1P19838 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKB1P19838 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.17■□□□□ 0.66
NFKB1P19838 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
NFKB1P19838 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKB1P19838 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NFKB1P19838 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NFKB1P19838 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKB1P19838 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NFKB1P19838 KRT8P32-201ENST00000512863 1461 ntBASIC19.16■□□□□ 0.66
NFKB1P19838 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NFKB1P19838 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.16■□□□□ 0.66
NFKB1P19838 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKB1P19838 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.16■□□□□ 0.66
NFKB1P19838 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKB1P19838 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 AP006294.2-201ENST00000641667 209 ntBASIC19.16■□□□□ 0.66
NFKB1P19838 AC068587.9-201ENST00000641814 219 ntBASIC19.16■□□□□ 0.66
NFKB1P19838 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.16■□□□□ 0.66
NFKB1P19838 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NFKB1P19838 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 WIZP1-201ENST00000531444 2299 ntBASIC19.16■□□□□ 0.66
NFKB1P19838 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKB1P19838 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKB1P19838 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 MTMR9LP-203ENST00000426597 1545 ntBASIC19.15■□□□□ 0.66
NFKB1P19838 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.15■□□□□ 0.66
NFKB1P19838 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NFKB1P19838 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 SNORA78-201ENST00000459373 127 ntBASIC19.15■□□□□ 0.66
NFKB1P19838 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms