Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
HMGN1P05114 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HMGN1P05114 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGN1P05114 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN1P05114 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGN1P05114 AL160286.2-201ENST00000567150 934 ntBASIC17.1■□□□□ 0.33
HMGN1P05114 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.1■□□□□ 0.33
HMGN1P05114 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGN1P05114 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGN1P05114 MYC-209ENST00000641252 345 ntBASIC17.1■□□□□ 0.33
HMGN1P05114 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMGN1P05114 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HMGN1P05114 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGN1P05114 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN1P05114 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
HMGN1P05114 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HMGN1P05114 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGN1P05114 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGN1P05114 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGN1P05114 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
HMGN1P05114 AC008687.6-201ENST00000596318 630 ntBASIC17.09■□□□□ 0.33
HMGN1P05114 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 AL162741.1-201ENST00000565563 1558 ntBASIC17.09■□□□□ 0.33
HMGN1P05114 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGN1P05114 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.09■□□□□ 0.33
HMGN1P05114 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HMGN1P05114 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGN1P05114 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGN1P05114 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
HMGN1P05114 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGN1P05114 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGN1P05114 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
HMGN1P05114 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGN1P05114 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.08■□□□□ 0.32
HMGN1P05114 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.08■□□□□ 0.32
HMGN1P05114 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGN1P05114 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGN1P05114 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HMGN1P05114 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGN1P05114 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HMGN1P05114 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGN1P05114 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HMGN1P05114 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HMGN1P05114 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGN1P05114 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGN1P05114 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGN1P05114 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms