Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-ND3P03897 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND3P03897 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND3P03897 KRT8P8-201ENST00000434750 1448 ntBASIC19.21■□□□□ 0.67
MT-ND3P03897 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND3P03897 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-ND3P03897 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-ND3P03897 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-ND3P03897 AC120498.8-201ENST00000614275 531 ntBASIC19.21■□□□□ 0.67
MT-ND3P03897 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MT-ND3P03897 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.21■□□□□ 0.67
MT-ND3P03897 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-ND3P03897 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-ND3P03897 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND3P03897 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND3P03897 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MT-ND3P03897 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MT-ND3P03897 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND3P03897 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND3P03897 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MT-ND3P03897 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND3P03897 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.2■□□□□ 0.66
MT-ND3P03897 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND3P03897 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND3P03897 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
MT-ND3P03897 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND3P03897 FEM1AP3-201ENST00000403722 1741 ntBASIC19.2■□□□□ 0.66
MT-ND3P03897 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND3P03897 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MT-ND3P03897 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.19■□□□□ 0.66
MT-ND3P03897 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 AC233263.1-201ENST00000578059 224 ntBASIC19.19■□□□□ 0.66
MT-ND3P03897 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-ND3P03897 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-ND3P03897 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND3P03897 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND3P03897 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 AC124283.5-201ENST00000624661 1809 ntBASIC19.18■□□□□ 0.66
MT-ND3P03897 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 AL354751.1-201ENST00000412768 1863 ntBASIC19.18■□□□□ 0.66
MT-ND3P03897 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms