Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 CCR12P-201ENST00000446203 998 ntBASIC19.75■□□□□ 0.75
APOEP02649 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.75■□□□□ 0.75
APOEP02649 CA15P1-201ENST00000481698 905 ntBASIC19.75■□□□□ 0.75
APOEP02649 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 EGLN1P1-201ENST00000531623 762 ntBASIC19.75■□□□□ 0.75
APOEP02649 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.75■□□□□ 0.75
APOEP02649 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.75■□□□□ 0.75
APOEP02649 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.75■□□□□ 0.75
APOEP02649 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.75■□□□□ 0.75
APOEP02649 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOEP02649 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
APOEP02649 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
APOEP02649 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.74■□□□□ 0.75
APOEP02649 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 TSPY14P-201ENST00000303979 915 ntBASIC19.74■□□□□ 0.75
APOEP02649 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 AC128688.1-201ENST00000487626 519 ntBASIC19.74■□□□□ 0.75
APOEP02649 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 AC145285.6-201ENST00000604632 637 ntBASIC19.74■□□□□ 0.75
APOEP02649 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
APOEP02649 AC116562.4-202ENST00000641738 218 ntBASIC19.74■□□□□ 0.75
APOEP02649 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
APOEP02649 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
APOEP02649 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.74■□□□□ 0.75
APOEP02649 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
APOEP02649 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOEP02649 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.73■□□□□ 0.75
APOEP02649 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
APOEP02649 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
APOEP02649 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 ECEL1P3-201ENST00000427961 737 ntBASIC19.73■□□□□ 0.75
APOEP02649 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
APOEP02649 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.73■□□□□ 0.75
APOEP02649 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 AC097493.4-201ENST00000641197 219 ntBASIC19.73■□□□□ 0.75
APOEP02649 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.73■□□□□ 0.75
APOEP02649 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
APOEP02649 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
APOEP02649 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 KRT18P22-201ENST00000402024 1347 ntBASIC19.73■□□□□ 0.75
APOEP02649 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
APOEP02649 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOEP02649 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.72■□□□□ 0.75
APOEP02649 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
APOEP02649 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.72■□□□□ 0.75
APOEP02649 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOEP02649 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.72■□□□□ 0.75
APOEP02649 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.72■□□□□ 0.75
APOEP02649 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.72■□□□□ 0.75
APOEP02649 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.72■□□□□ 0.75
APOEP02649 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.72■□□□□ 0.75
APOEP02649 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.72■□□□□ 0.75
APOEP02649 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms