Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.23■□□□□ 0.83
CSPG5O95196 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.23■□□□□ 0.83
CSPG5O95196 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSPG5O95196 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSPG5O95196 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG5O95196 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CSPG5O95196 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 KRT8P10-201ENST00000450021 1447 ntBASIC20.22■□□□□ 0.83
CSPG5O95196 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG5O95196 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.22■□□□□ 0.83
CSPG5O95196 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CSPG5O95196 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSPG5O95196 IFNL4P1-201ENST00000607083 540 ntBASIC20.22■□□□□ 0.83
CSPG5O95196 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.22■□□□□ 0.83
CSPG5O95196 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG5O95196 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CSPG5O95196 AC007952.6-201ENST00000573168 2673 ntBASIC20.22■□□□□ 0.83
CSPG5O95196 AC003957.1-201ENST00000625108 2673 ntBASIC20.22■□□□□ 0.83
CSPG5O95196 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CSPG5O95196 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSPG5O95196 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.22■□□□□ 0.83
CSPG5O95196 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CSPG5O95196 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.21■□□□□ 0.83
CSPG5O95196 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CSPG5O95196 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.21■□□□□ 0.83
CSPG5O95196 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 AP002383.4-201ENST00000442518 975 ntBASIC20.21■□□□□ 0.83
CSPG5O95196 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.21■□□□□ 0.83
CSPG5O95196 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG5O95196 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CSPG5O95196 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CSPG5O95196 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG5O95196 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG5O95196 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.2■□□□□ 0.82
CSPG5O95196 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.2■□□□□ 0.82
CSPG5O95196 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG5O95196 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG5O95196 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CSPG5O95196 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.2■□□□□ 0.82
CSPG5O95196 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 FDX1P1-201ENST00000449115 551 ntBASIC20.2■□□□□ 0.82
CSPG5O95196 AC009078.2-202ENST00000463353 338 ntBASIC20.2■□□□□ 0.82
CSPG5O95196 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.2■□□□□ 0.82
CSPG5O95196 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 MIR3180-1-201ENST00000580374 94 ntBASIC20.2■□□□□ 0.82
CSPG5O95196 MIR3180-3-201ENST00000584616 94 ntBASIC20.2■□□□□ 0.82
CSPG5O95196 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.2■□□□□ 0.82
CSPG5O95196 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CSPG5O95196 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG5O95196 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
CSPG5O95196 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CSPG5O95196 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSPG5O95196 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
CSPG5O95196 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
CSPG5O95196 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CSPG5O95196 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.19■□□□□ 0.82
CSPG5O95196 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CSPG5O95196 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
CSPG5O95196 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.19■□□□□ 0.82
CSPG5O95196 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CSPG5O95196 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.19■□□□□ 0.82
CSPG5O95196 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CSPG5O95196 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CSPG5O95196 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.19■□□□□ 0.82
CSPG5O95196 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 SDHAP1-207ENST00000440850 2000 ntBASIC20.19■□□□□ 0.82
CSPG5O95196 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG5O95196 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
CSPG5O95196 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG5O95196 AC112907.3-201ENST00000577781 2400 ntBASIC20.18■□□□□ 0.82
CSPG5O95196 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms