Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 AL109659.2-201ENST00000606809 1674 ntBASIC17.4■□□□□ 0.38
NKX2-2O95096 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.4■□□□□ 0.38
NKX2-2O95096 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 AC093827.2-201ENST00000512654 315 ntBASIC17.4■□□□□ 0.38
NKX2-2O95096 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.4■□□□□ 0.38
NKX2-2O95096 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NKX2-2O95096 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX2-2O95096 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NKX2-2O95096 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NKX2-2O95096 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.39■□□□□ 0.38
NKX2-2O95096 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.39■□□□□ 0.37
NKX2-2O95096 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX2-2O95096 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NKX2-2O95096 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.39■□□□□ 0.37
NKX2-2O95096 AL390955.1-201ENST00000428694 934 ntBASIC17.39■□□□□ 0.37
NKX2-2O95096 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 AC066615.1-201ENST00000640911 628 ntBASIC17.39■□□□□ 0.37
NKX2-2O95096 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX2-2O95096 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX2-2O95096 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX2-2O95096 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 AL023284.2-201ENST00000405850 579 ntBASIC17.38■□□□□ 0.37
NKX2-2O95096 MIR1238-201ENST00000408483 83 ntBASIC17.38■□□□□ 0.37
NKX2-2O95096 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 SLC25A1P2-201ENST00000430693 912 ntBASIC17.38■□□□□ 0.37
NKX2-2O95096 AL023803.3-201ENST00000615559 522 ntBASIC17.38■□□□□ 0.37
NKX2-2O95096 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NKX2-2O95096 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms