Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KDM4BO94953 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.56■□□□□ 0.24
KDM4BO94953 RPS2P52-201ENST00000469610 820 ntBASIC16.56■□□□□ 0.24
KDM4BO94953 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.56■□□□□ 0.24
KDM4BO94953 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.56■□□□□ 0.24
KDM4BO94953 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.56■□□□□ 0.24
KDM4BO94953 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.56■□□□□ 0.24
KDM4BO94953 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.56■□□□□ 0.24
KDM4BO94953 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KDM4BO94953 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.56■□□□□ 0.24
KDM4BO94953 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KDM4BO94953 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.55■□□□□ 0.24
KDM4BO94953 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.55■□□□□ 0.24
KDM4BO94953 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.55■□□□□ 0.24
KDM4BO94953 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.55■□□□□ 0.24
KDM4BO94953 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.55■□□□□ 0.24
KDM4BO94953 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KDM4BO94953 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.55■□□□□ 0.24
KDM4BO94953 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.55■□□□□ 0.24
KDM4BO94953 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KDM4BO94953 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 AC092368.3-202ENST00000574180 1591 ntBASIC16.55■□□□□ 0.24
KDM4BO94953 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KDM4BO94953 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KDM4BO94953 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.54■□□□□ 0.24
KDM4BO94953 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 AC124283.5-201ENST00000624661 1809 ntBASIC16.54■□□□□ 0.24
KDM4BO94953 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 Z98044.1-201ENST00000632503 1764 ntBASIC16.54■□□□□ 0.24
KDM4BO94953 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.54■□□□□ 0.24
KDM4BO94953 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.54■□□□□ 0.24
KDM4BO94953 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.54■□□□□ 0.24
KDM4BO94953 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KDM4BO94953 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KDM4BO94953 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.54■□□□□ 0.24
KDM4BO94953 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.54■□□□□ 0.24
KDM4BO94953 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KDM4BO94953 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.53■□□□□ 0.24
KDM4BO94953 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 AL512353.2-201ENST00000448759 1962 ntBASIC16.53■□□□□ 0.24
KDM4BO94953 BICD1-207ENST00000551848 1962 ntBASIC16.53■□□□□ 0.24
KDM4BO94953 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.53■□□□□ 0.24
KDM4BO94953 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KDM4BO94953 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KDM4BO94953 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms