Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT33AO76009 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT33AO76009 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT33AO76009 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT33AO76009 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT33AO76009 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT33AO76009 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KRT33AO76009 KRT16P1-201ENST00000399124 1418 ntBASIC17.13■□□□□ 0.33
KRT33AO76009 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT33AO76009 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KRT33AO76009 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT33AO76009 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT33AO76009 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT33AO76009 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT33AO76009 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT33AO76009 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KRT33AO76009 AC012618.2-201ENST00000428058 849 ntBASIC17.12■□□□□ 0.33
KRT33AO76009 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT33AO76009 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT33AO76009 AL353708.3-201ENST00000610272 989 ntBASIC17.12■□□□□ 0.33
KRT33AO76009 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT33AO76009 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT33AO76009 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KRT33AO76009 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT33AO76009 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT33AO76009 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT33AO76009 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT33AO76009 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT33AO76009 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KRT33AO76009 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT33AO76009 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT33AO76009 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT33AO76009 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT33AO76009 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KRT33AO76009 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT33AO76009 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT33AO76009 ZNF815P-204ENST00000434898 1737 ntBASIC17.1■□□□□ 0.33
KRT33AO76009 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT33AO76009 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT33AO76009 FAM197Y1-201ENST00000421178 764 ntBASIC17.1■□□□□ 0.33
KRT33AO76009 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 AC093827.2-201ENST00000512654 315 ntBASIC17.1■□□□□ 0.33
KRT33AO76009 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT33AO76009 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT33AO76009 AL160286.2-201ENST00000567150 934 ntBASIC17.1■□□□□ 0.33
KRT33AO76009 AC233702.5-201ENST00000584107 538 ntBASIC17.1■□□□□ 0.33
KRT33AO76009 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT33AO76009 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.1■□□□□ 0.33
KRT33AO76009 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT33AO76009 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms