Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 Z99916.2-201ENST00000604037 246 ntBASIC18.9■□□□□ 0.62
GPC4O75487 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC4O75487 PKD1P1-201ENST00000458669 6805 ntBASIC18.9■□□□□ 0.62
GPC4O75487 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC4O75487 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC4O75487 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
GPC4O75487 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC4O75487 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
GPC4O75487 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
GPC4O75487 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC4O75487 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC4O75487 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GPC4O75487 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GPC4O75487 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.89■□□□□ 0.62
GPC4O75487 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.89■□□□□ 0.61
GPC4O75487 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 Z85996.1-201ENST00000494644 937 ntBASIC18.89■□□□□ 0.61
GPC4O75487 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.89■□□□□ 0.61
GPC4O75487 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.89■□□□□ 0.61
GPC4O75487 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC4O75487 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC4O75487 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC4O75487 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GPC4O75487 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC4O75487 AC008550.1-201ENST00000511500 884 ntBASIC18.88■□□□□ 0.61
GPC4O75487 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC4O75487 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC4O75487 AC131212.4-201ENST00000623606 975 ntBASIC18.88■□□□□ 0.61
GPC4O75487 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.88■□□□□ 0.61
GPC4O75487 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GPC4O75487 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 KRT16P1-201ENST00000399124 1418 ntBASIC18.88■□□□□ 0.61
GPC4O75487 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC4O75487 KRT8P41-201ENST00000533985 1514 ntBASIC18.88■□□□□ 0.61
GPC4O75487 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
GPC4O75487 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC4O75487 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC4O75487 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC4O75487 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.87■□□□□ 0.61
GPC4O75487 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC4O75487 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms