Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC26.08■■□□□ 1.76
BRD4O60885 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 AL450487.1-201ENST00000426799 995 ntBASIC26.07■■□□□ 1.76
BRD4O60885 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC26.07■■□□□ 1.76
BRD4O60885 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC26.07■■□□□ 1.76
BRD4O60885 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC26.07■■□□□ 1.76
BRD4O60885 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
BRD4O60885 AC093458.2-201ENST00000623150 629 ntBASIC26.07■■□□□ 1.76
BRD4O60885 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC26.07■■□□□ 1.76
BRD4O60885 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
BRD4O60885 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
BRD4O60885 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BRD4O60885 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC26.07■■□□□ 1.76
BRD4O60885 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
BRD4O60885 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC26.06■■□□□ 1.76
BRD4O60885 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.06■■□□□ 1.76
BRD4O60885 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BRD4O60885 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
BRD4O60885 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC26.06■■□□□ 1.76
BRD4O60885 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
BRD4O60885 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BRD4O60885 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BRD4O60885 FGF14-AS2-201ENST00000606448 1074 ntBASIC26.06■■□□□ 1.76
BRD4O60885 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
BRD4O60885 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC26.05■■□□□ 1.76
BRD4O60885 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD4O60885 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC26.05■■□□□ 1.76
BRD4O60885 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
BRD4O60885 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
BRD4O60885 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
BRD4O60885 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD4O60885 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 HBZP1-201ENST00000354915 429 ntBASIC26.05■■□□□ 1.76
BRD4O60885 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.05■■□□□ 1.76
BRD4O60885 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD4O60885 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD4O60885 NDUFV2-AS1-203ENST00000608008 779 ntBASIC26.05■■□□□ 1.76
BRD4O60885 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.05■■□□□ 1.76
BRD4O60885 CLN6-214ENST00000636314 442 ntTSL 3 BASIC26.05■■□□□ 1.76
BRD4O60885 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD4O60885 AC098818.2-201ENST00000564925 2320 ntBASIC26.05■■□□□ 1.76
BRD4O60885 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD4O60885 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
BRD4O60885 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC26.04■■□□□ 1.76
BRD4O60885 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 FXN-203ENST00000396366 922 ntTSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 TSPY23P-201ENST00000440136 739 ntBASIC26.04■■□□□ 1.76
BRD4O60885 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 CLEC4GP1-201ENST00000596555 870 ntBASIC26.04■■□□□ 1.76
BRD4O60885 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD4O60885 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.04■■□□□ 1.76
BRD4O60885 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 AP000974.1-201ENST00000623909 2387 ntBASIC26.03■■□□□ 1.76
BRD4O60885 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.03■■□□□ 1.76
BRD4O60885 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC26.03■■□□□ 1.76
BRD4O60885 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC26.03■■□□□ 1.76
BRD4O60885 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC26.03■■□□□ 1.76
BRD4O60885 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC26.03■■□□□ 1.76
BRD4O60885 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD4O60885 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
BRD4O60885 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
BRD4O60885 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms