Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZIC3O60481 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.98■□□□□ 0.31
ZIC3O60481 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ZIC3O60481 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.97■□□□□ 0.31
ZIC3O60481 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.97■□□□□ 0.31
ZIC3O60481 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ZIC3O60481 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.97■□□□□ 0.31
ZIC3O60481 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ZIC3O60481 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.97■□□□□ 0.31
ZIC3O60481 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ZIC3O60481 AC036111.1-201ENST00000533973 1582 ntBASIC16.97■□□□□ 0.31
ZIC3O60481 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZIC3O60481 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZIC3O60481 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ZIC3O60481 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.96■□□□□ 0.31
ZIC3O60481 YBX1P2-201ENST00000489612 999 ntBASIC16.96■□□□□ 0.31
ZIC3O60481 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.96■□□□□ 0.31
ZIC3O60481 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.96■□□□□ 0.31
ZIC3O60481 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.96■□□□□ 0.31
ZIC3O60481 NEK4P2-201ENST00000580004 1012 ntBASIC16.96■□□□□ 0.31
ZIC3O60481 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.96■□□□□ 0.31
ZIC3O60481 AC011558.1-201ENST00000623459 338 ntBASIC16.96■□□□□ 0.31
ZIC3O60481 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.96■□□□□ 0.31
ZIC3O60481 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.96■□□□□ 0.31
ZIC3O60481 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZIC3O60481 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZIC3O60481 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ZIC3O60481 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.96■□□□□ 0.3
ZIC3O60481 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.96■□□□□ 0.3
ZIC3O60481 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZIC3O60481 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZIC3O60481 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.3
ZIC3O60481 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 HEIH-201ENST00000623091 1652 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.95■□□□□ 0.3
ZIC3O60481 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
ZIC3O60481 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZIC3O60481 MIR564-202ENST00000385049 94 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ZIC3O60481 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
ZIC3O60481 AK4P3-201ENST00000418260 669 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.95■□□□□ 0.3
ZIC3O60481 DUX4L26-201ENST00000489078 1255 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.95■□□□□ 0.3
ZIC3O60481 AC140113.3-201ENST00000605663 199 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 AL031432.5-201ENST00000641059 760 ntBASIC16.95■□□□□ 0.3
ZIC3O60481 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ZIC3O60481 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.95■□□□□ 0.3
ZIC3O60481 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZIC3O60481 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms