Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA12O60330 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 LINC01311-201ENST00000565162 1445 ntBASIC18.69■□□□□ 0.58
PCDHGA12O60330 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 ATP5G2P1-201ENST00000433580 426 ntBASIC18.69■□□□□ 0.58
PCDHGA12O60330 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PCDHGA12O60330 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 AL158211.5-201ENST00000623583 2518 ntBASIC18.69■□□□□ 0.58
PCDHGA12O60330 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA12O60330 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA12O60330 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGA12O60330 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.67■□□□□ 0.58
PCDHGA12O60330 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 AC009237.14-201ENST00000609975 1594 ntBASIC18.67■□□□□ 0.58
PCDHGA12O60330 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA12O60330 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA12O60330 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 AL691432.2-201ENST00000607222 2038 ntBASIC18.66■□□□□ 0.58
PCDHGA12O60330 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.66■□□□□ 0.58
PCDHGA12O60330 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms