Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYTH3O43739 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CYTH3O43739 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYTH3O43739 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CYTH3O43739 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CYTH3O43739 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.69■■□□□ 1.06
CYTH3O43739 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.69■■□□□ 1.06
CYTH3O43739 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.69■■□□□ 1.06
CYTH3O43739 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CYTH3O43739 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
CYTH3O43739 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.69■■□□□ 1.06
CYTH3O43739 COX11P1-201ENST00000489116 835 ntBASIC21.69■■□□□ 1.06
CYTH3O43739 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.69■■□□□ 1.06
CYTH3O43739 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CYTH3O43739 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 AC083906.6-201ENST00000641366 219 ntBASIC21.69■■□□□ 1.06
CYTH3O43739 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.69■■□□□ 1.06
CYTH3O43739 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CYTH3O43739 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.68■■□□□ 1.06
CYTH3O43739 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.68■■□□□ 1.06
CYTH3O43739 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.68■■□□□ 1.06
CYTH3O43739 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.68■■□□□ 1.06
CYTH3O43739 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.68■■□□□ 1.06
CYTH3O43739 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
CYTH3O43739 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CYTH3O43739 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CYTH3O43739 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.68■■□□□ 1.06
CYTH3O43739 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 MIR1224-201ENST00000408193 85 ntBASIC21.67■■□□□ 1.06
CYTH3O43739 AK4P3-201ENST00000418260 669 ntBASIC21.67■■□□□ 1.06
CYTH3O43739 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.67■■□□□ 1.06
CYTH3O43739 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 NEK4P2-201ENST00000580004 1012 ntBASIC21.67■■□□□ 1.06
CYTH3O43739 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.67■■□□□ 1.06
CYTH3O43739 AC010331.1-201ENST00000611423 582 ntBASIC21.67■■□□□ 1.06
CYTH3O43739 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.67■■□□□ 1.06
CYTH3O43739 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CYTH3O43739 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CYTH3O43739 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYTH3O43739 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CYTH3O43739 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CYTH3O43739 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CYTH3O43739 AP000974.1-201ENST00000623909 2387 ntBASIC21.66■■□□□ 1.06
CYTH3O43739 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.66■■□□□ 1.06
CYTH3O43739 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CYTH3O43739 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYTH3O43739 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms