Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.92■□□□□ 0.46
PROM1O43490 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
PROM1O43490 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PROM1O43490 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.92■□□□□ 0.46
PROM1O43490 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.92■□□□□ 0.46
PROM1O43490 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PROM1O43490 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.91■□□□□ 0.46
PROM1O43490 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
PROM1O43490 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.91■□□□□ 0.46
PROM1O43490 ECEL1P3-201ENST00000427961 737 ntBASIC17.91■□□□□ 0.46
PROM1O43490 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.91■□□□□ 0.46
PROM1O43490 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PROM1O43490 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
PROM1O43490 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.9■□□□□ 0.46
PROM1O43490 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PROM1O43490 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 UNC93B2-201ENST00000285383 730 ntBASIC17.9■□□□□ 0.46
PROM1O43490 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.9■□□□□ 0.46
PROM1O43490 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 MFAP1P1-201ENST00000442257 1255 ntBASIC17.9■□□□□ 0.46
PROM1O43490 RBM17P1-201ENST00000453646 1190 ntBASIC17.9■□□□□ 0.46
PROM1O43490 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.9■□□□□ 0.46
PROM1O43490 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.9■□□□□ 0.46
PROM1O43490 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.9■□□□□ 0.46
PROM1O43490 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.9■□□□□ 0.46
PROM1O43490 AC073912.3-201ENST00000624414 853 ntBASIC17.9■□□□□ 0.46
PROM1O43490 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.9■□□□□ 0.46
PROM1O43490 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PROM1O43490 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PROM1O43490 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PROM1O43490 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PROM1O43490 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 MIR1224-201ENST00000408193 85 ntBASIC17.89■□□□□ 0.45
PROM1O43490 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PROM1O43490 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PROM1O43490 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PROM1O43490 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PROM1O43490 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.89■□□□□ 0.45
PROM1O43490 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PROM1O43490 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PROM1O43490 KRT8P3-201ENST00000519669 1449 ntBASIC17.89■□□□□ 0.45
PROM1O43490 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PROM1O43490 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PROM1O43490 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms