Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MSI1O43347 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
MSI1O43347 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.58■□□□□ 0.72
MSI1O43347 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MSI1O43347 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.58■□□□□ 0.72
MSI1O43347 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 AC141257.4-201ENST00000634557 245 ntBASIC19.58■□□□□ 0.72
MSI1O43347 AC136944.6-201ENST00000634818 245 ntBASIC19.58■□□□□ 0.72
MSI1O43347 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
MSI1O43347 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.58■□□□□ 0.72
MSI1O43347 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSI1O43347 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MSI1O43347 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.57■□□□□ 0.72
MSI1O43347 MCCD1P1-208ENST00000445732 328 ntBASIC19.57■□□□□ 0.72
MSI1O43347 AC104076.2-201ENST00000448912 469 ntBASIC19.57■□□□□ 0.72
MSI1O43347 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.57■□□□□ 0.72
MSI1O43347 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.57■□□□□ 0.72
MSI1O43347 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
MSI1O43347 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.57■□□□□ 0.72
MSI1O43347 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
MSI1O43347 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MSI1O43347 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.56■□□□□ 0.72
MSI1O43347 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.56■□□□□ 0.72
MSI1O43347 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 AC009947.2-201ENST00000444014 672 ntBASIC19.56■□□□□ 0.72
MSI1O43347 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.56■□□□□ 0.72
MSI1O43347 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 AC139887.4-201ENST00000607877 719 ntBASIC19.56■□□□□ 0.72
MSI1O43347 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MSI1O43347 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MSI1O43347 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MSI1O43347 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSI1O43347 AC008556.1-201ENST00000610908 2040 ntBASIC19.56■□□□□ 0.72
MSI1O43347 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
MSI1O43347 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 AC120498.9-201ENST00000339021 3867 ntBASIC19.55■□□□□ 0.72
MSI1O43347 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 AC117947.1-201ENST00000427448 529 ntBASIC19.55■□□□□ 0.72
MSI1O43347 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.55■□□□□ 0.72
MSI1O43347 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 AL023973.1-201ENST00000624619 620 ntBASIC19.55■□□□□ 0.72
MSI1O43347 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MSI1O43347 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.55■□□□□ 0.72
MSI1O43347 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSI1O43347 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MSI1O43347 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms