Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTLC1O15269 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.18■□□□□ 0.82
SPTLC1O15269 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 AC022616.7-201ENST00000525383 220 ntBASIC20.18■□□□□ 0.82
SPTLC1O15269 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.18■□□□□ 0.82
SPTLC1O15269 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.18■□□□□ 0.82
SPTLC1O15269 LINC01238-205ENST00000567549 1107 ntBASIC20.18■□□□□ 0.82
SPTLC1O15269 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SPTLC1O15269 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
SPTLC1O15269 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SPTLC1O15269 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SPTLC1O15269 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC1O15269 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTLC1O15269 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC1O15269 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC1O15269 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC1O15269 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTLC1O15269 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPTLC1O15269 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC1O15269 AL161938.1-201ENST00000569833 2180 ntBASIC20.17■□□□□ 0.82
SPTLC1O15269 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTLC1O15269 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC1O15269 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTLC1O15269 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.17■□□□□ 0.82
SPTLC1O15269 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.17■□□□□ 0.82
SPTLC1O15269 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SPTLC1O15269 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC1O15269 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTLC1O15269 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.17■□□□□ 0.82
SPTLC1O15269 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPTLC1O15269 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPTLC1O15269 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPTLC1O15269 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
SPTLC1O15269 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.16■□□□□ 0.82
SPTLC1O15269 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPTLC1O15269 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 MCCD1P1-208ENST00000445732 328 ntBASIC20.16■□□□□ 0.82
SPTLC1O15269 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
SPTLC1O15269 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.16■□□□□ 0.82
SPTLC1O15269 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.16■□□□□ 0.82
SPTLC1O15269 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.16■□□□□ 0.82
SPTLC1O15269 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.16■□□□□ 0.82
SPTLC1O15269 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.16■□□□□ 0.82
SPTLC1O15269 RCC2P3-201ENST00000418112 1537 ntBASIC20.16■□□□□ 0.82
SPTLC1O15269 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.16■□□□□ 0.82
SPTLC1O15269 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTLC1O15269 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.15■□□□□ 0.82
SPTLC1O15269 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 FAM8A6P-201ENST00000407496 1135 ntBASIC20.15■□□□□ 0.82
SPTLC1O15269 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPTLC1O15269 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.15■□□□□ 0.82
SPTLC1O15269 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTLC1O15269 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTLC1O15269 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.15■□□□□ 0.82
SPTLC1O15269 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.15■□□□□ 0.82
SPTLC1O15269 AC008556.1-201ENST00000610908 2040 ntBASIC20.15■□□□□ 0.82
SPTLC1O15269 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTLC1O15269 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPTLC1O15269 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPTLC1O15269 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SPTLC1O15269 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SPTLC1O15269 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.14■□□□□ 0.81
SPTLC1O15269 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 KRT8P32-201ENST00000512863 1461 ntBASIC20.14■□□□□ 0.81
SPTLC1O15269 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms