Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.42■□□□□ 0.86
CEP290O15078 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 MIR5100-201ENST00000579544 119 ntBASIC20.42■□□□□ 0.86
CEP290O15078 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.42■□□□□ 0.86
CEP290O15078 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CEP290O15078 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 AP001271.2-201ENST00000624018 1556 ntBASIC20.41■□□□□ 0.86
CEP290O15078 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.41■□□□□ 0.86
CEP290O15078 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.41■□□□□ 0.86
CEP290O15078 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.41■□□□□ 0.86
CEP290O15078 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.41■□□□□ 0.86
CEP290O15078 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.41■□□□□ 0.86
CEP290O15078 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.41■□□□□ 0.86
CEP290O15078 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.41■□□□□ 0.86
CEP290O15078 Z83851.2-201ENST00000609564 659 ntBASIC20.41■□□□□ 0.86
CEP290O15078 AC012645.4-201ENST00000610691 1061 ntBASIC20.41■□□□□ 0.86
CEP290O15078 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.41■□□□□ 0.86
CEP290O15078 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.41■□□□□ 0.86
CEP290O15078 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.41■□□□□ 0.86
CEP290O15078 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.41■□□□□ 0.86
CEP290O15078 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.41■□□□□ 0.86
CEP290O15078 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CEP290O15078 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.41■□□□□ 0.86
CEP290O15078 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CEP290O15078 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.4■□□□□ 0.86
CEP290O15078 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CEP290O15078 FBXW4P1-201ENST00000426721 2239 ntBASIC20.4■□□□□ 0.86
CEP290O15078 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CEP290O15078 AC007967.2-201ENST00000432613 625 ntBASIC20.4■□□□□ 0.86
CEP290O15078 GUSBP12-201ENST00000513727 720 ntBASIC20.4■□□□□ 0.86
CEP290O15078 AIRN-201ENST00000601203 4374 ntBASIC20.4■□□□□ 0.86
CEP290O15078 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CEP290O15078 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CEP290O15078 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.39■□□□□ 0.86
CEP290O15078 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
CEP290O15078 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.39■□□□□ 0.86
CEP290O15078 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.39■□□□□ 0.86
CEP290O15078 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.39■□□□□ 0.86
CEP290O15078 AC010240.3-201ENST00000607688 395 ntBASIC20.39■□□□□ 0.86
CEP290O15078 AC008735.5-201ENST00000623544 497 ntBASIC20.39■□□□□ 0.86
CEP290O15078 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CEP290O15078 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CEP290O15078 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CEP290O15078 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.39■□□□□ 0.85
CEP290O15078 MCCD1P1-208ENST00000445732 328 ntBASIC20.39■□□□□ 0.85
CEP290O15078 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.39■□□□□ 0.85
CEP290O15078 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
CEP290O15078 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.39■□□□□ 0.85
CEP290O15078 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEP290O15078 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.38■□□□□ 0.85
CEP290O15078 FGFR3P6-201ENST00000457012 610 ntBASIC20.38■□□□□ 0.85
CEP290O15078 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.38■□□□□ 0.85
CEP290O15078 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.38■□□□□ 0.85
CEP290O15078 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.38■□□□□ 0.85
CEP290O15078 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CEP290O15078 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 MCCD1P2-201ENST00000423228 335 ntBASIC20.38■□□□□ 0.85
CEP290O15078 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.38■□□□□ 0.85
CEP290O15078 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.38■□□□□ 0.85
CEP290O15078 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.38■□□□□ 0.85
CEP290O15078 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.38■□□□□ 0.85
CEP290O15078 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.38■□□□□ 0.85
CEP290O15078 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CEP290O15078 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEP290O15078 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEP290O15078 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CEP290O15078 AP003733.1-201ENST00000491725 852 ntBASIC20.37■□□□□ 0.85
CEP290O15078 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.37■□□□□ 0.85
CEP290O15078 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.37■□□□□ 0.85
CEP290O15078 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.37■□□□□ 0.85
CEP290O15078 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.37■□□□□ 0.85
CEP290O15078 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.37■□□□□ 0.85
CEP290O15078 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEP290O15078 HOXB1-202ENST00000577092 1414 ntBASIC20.37■□□□□ 0.85
CEP290O15078 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEP290O15078 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
CEP290O15078 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEP290O15078 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms