Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN4O14493 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN4O14493 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
CLDN4O14493 AC211429.1-201ENST00000415277 523 ntBASIC17.77■□□□□ 0.44
CLDN4O14493 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN4O14493 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN4O14493 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLDN4O14493 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN4O14493 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN4O14493 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN4O14493 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN4O14493 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN4O14493 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN4O14493 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN4O14493 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLDN4O14493 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN4O14493 AC092338.2-201ENST00000568827 1415 ntBASIC17.76■□□□□ 0.43
CLDN4O14493 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN4O14493 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN4O14493 AC007663.1-201ENST00000438948 1240 ntBASIC17.76■□□□□ 0.43
CLDN4O14493 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN4O14493 AC097493.4-201ENST00000641197 219 ntBASIC17.76■□□□□ 0.43
CLDN4O14493 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN4O14493 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN4O14493 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN4O14493 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN4O14493 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN4O14493 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN4O14493 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CLDN4O14493 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.75■□□□□ 0.43
CLDN4O14493 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN4O14493 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 AL512604.3-201ENST00000569583 964 ntBASIC17.75■□□□□ 0.43
CLDN4O14493 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.75■□□□□ 0.43
CLDN4O14493 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN4O14493 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.75■□□□□ 0.43
CLDN4O14493 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLDN4O14493 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN4O14493 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLDN4O14493 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN4O14493 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN4O14493 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN4O14493 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN4O14493 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN4O14493 AP003041.3-201ENST00000527151 707 ntBASIC17.74■□□□□ 0.43
CLDN4O14493 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN4O14493 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN4O14493 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN4O14493 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN4O14493 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms