Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 AC092647.4-201ENST00000457211 535 ntBASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 PRSS44-201ENST00000515154 1146 ntBASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA2E9PIF3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 RNF165-205ENST00000588679 2904 ntBASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 SDHAP1-207ENST00000440850 2000 ntBASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 AL032819.2-201ENST00000624543 2162 ntBASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA2E9PIF3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 TSPY5P-201ENST00000426936 936 ntBASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 AC140113.3-201ENST00000605663 199 ntBASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 AC005332.7-201ENST00000614046 2005 ntBASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA2E9PIF3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 AC011558.1-201ENST00000623459 338 ntBASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms