Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM49D1C9J1S8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM49D1C9J1S8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 AL138781.1-201ENST00000566567 1274 ntBASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM49D1C9J1S8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM49D1C9J1S8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM49D1C9J1S8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM49D1C9J1S8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM49D1C9J1S8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms