Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L3A6NE82 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 AC104390.1-201ENST00000555663 520 ntBASIC16.58■□□□□ 0.24
MBD3L3A6NE82 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 AL157888.1-201ENST00000631930 593 ntBASIC16.58■□□□□ 0.24
MBD3L3A6NE82 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MBD3L3A6NE82 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 HLA-F-220ENST00000434407 884 ntBASIC16.57■□□□□ 0.24
MBD3L3A6NE82 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 KRT18P56-201ENST00000507275 550 ntBASIC16.57■□□□□ 0.24
MBD3L3A6NE82 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MBD3L3A6NE82 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AC034236.2-201ENST00000606662 1610 ntBASIC16.56■□□□□ 0.24
MBD3L3A6NE82 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AC010240.3-201ENST00000607688 395 ntBASIC16.56■□□□□ 0.24
MBD3L3A6NE82 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AC079602.3-201ENST00000623931 403 ntBASIC16.56■□□□□ 0.24
MBD3L3A6NE82 AC068587.9-201ENST00000641814 219 ntBASIC16.56■□□□□ 0.24
MBD3L3A6NE82 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MBD3L3A6NE82 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 AL032819.2-201ENST00000624543 2162 ntBASIC16.55■□□□□ 0.24
MBD3L3A6NE82 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 ATP5G2P1-201ENST00000433580 426 ntBASIC16.55■□□□□ 0.24
MBD3L3A6NE82 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 AL136038.4-201ENST00000603606 1261 ntBASIC16.55■□□□□ 0.24
MBD3L3A6NE82 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.55■□□□□ 0.24
MBD3L3A6NE82 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.55■□□□□ 0.24
MBD3L3A6NE82 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.55■□□□□ 0.24
MBD3L3A6NE82 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms