Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 MIR718-201ENST00000390190 70 ntBASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 AL138781.2-201ENST00000617896 1843 ntBASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC162PA2VCL2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 KRT8P3-201ENST00000519669 1449 ntBASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 AP003071.4-201ENST00000562276 1284 ntBASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 DGCR10-201ENST00000609839 495 ntBASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 AP006294.2-201ENST00000641667 209 ntBASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC162PA2VCL2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC162PA2VCL2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 AC096733.2-201ENST00000609937 1394 ntBASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC162PA2VCL2 Z98044.1-201ENST00000632503 1764 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms