Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 AL390719.1-204ENST00000412397 1219 ntBASIC16.45■□□□□ 0.22
SHISA3A0PJX4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
SHISA3A0PJX4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 TSPY23P-201ENST00000440136 739 ntBASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AC034268.1-201ENST00000441047 882 ntBASIC16.44■□□□□ 0.22
SHISA3A0PJX4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AC231657.2-201ENST00000624556 255 ntBASIC16.44■□□□□ 0.22
SHISA3A0PJX4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 AC138028.4-201ENST00000564984 1845 ntBASIC16.44■□□□□ 0.22
SHISA3A0PJX4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.44■□□□□ 0.22
SHISA3A0PJX4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
SHISA3A0PJX4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 AC012317.2-201ENST00000623305 2251 ntBASIC16.43■□□□□ 0.22
SHISA3A0PJX4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 AC007322.1-201ENST00000426983 750 ntBASIC16.43■□□□□ 0.22
SHISA3A0PJX4 AC006015.1-201ENST00000429970 570 ntBASIC16.43■□□□□ 0.22
SHISA3A0PJX4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHISA3A0PJX4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHISA3A0PJX4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms