Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 Z85996.1-201ENST00000494644 937 ntBASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 MTDHP1-201ENST00000605323 784 ntBASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 PCDHB18P-201ENST00000524813 2368 ntBASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 MTMR9LP-203ENST00000426597 1545 ntBASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 NFYC-AS1-201ENST00000606277 1687 ntBASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV9S1A1TA0A576 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 AC069544.1-201ENST00000609399 999 ntBASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV9S1A1TA0A576 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.98■□□□□ 0.63
TCRBV9S1A1TA0A576 POU5F1P3-201ENST00000428824 1078 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms