Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 PRORSD1P-202ENST00000563365 2154 ntBASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AC011270.2-201ENST00000624293 2550 ntBASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 MYC-209ENST00000641252 345 ntBASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 AL390961.4-201ENST00000623958 2535 ntBASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV8-4A0A0B4J246 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AL138781.2-201ENST00000617896 1843 ntBASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms