Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV3A0A0B4J244 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV3A0A0B4J244 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TRAV3A0A0B4J244 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV3A0A0B4J244 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 Z85996.1-201ENST00000494644 937 ntBASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 AL133373.2-201ENST00000623187 2828 ntBASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV3A0A0B4J244 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 AL354751.1-201ENST00000412768 1863 ntBASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV3A0A0B4J244 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 ID1-201ENST00000376105 1233 ntBASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 AC239809.2-201ENST00000415381 517 ntBASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV3A0A0B4J244 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV3A0A0B4J244 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms