Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 IRX1P1-201ENST00000438849 1838 ntBASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV2A0A0B4J234 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 AC026471.1-201ENST00000564629 3026 ntBASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 AC018445.3-201ENST00000624177 1945 ntBASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV2A0A0B4J234 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV2A0A0B4J234 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 AP005242.2-201ENST00000580065 1175 ntBASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV2A0A0B4J234 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 CA15P1-201ENST00000481698 905 ntBASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 AP003071.4-201ENST00000562276 1284 ntBASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 REXO1L10P-201ENST00000615707 1290 ntBASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 REXO1L12P-201ENST00000622156 912 ntBASIC14.26□□□□□ -0.13
TRAV2A0A0B4J234 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms