Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.67□□□□□ -0.06
TRBV7-1A0A0A6YYK4 KRT17P2-201ENST00000300992 1314 ntBASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 CROCCP3-202ENST00000420820 1947 ntBASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC097488.1-201ENST00000507834 756 ntBASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 REXO1L10P-201ENST00000615707 1290 ntBASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 REXO1L12P-201ENST00000622156 912 ntBASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV7-1A0A0A6YYK4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 UNC93B2-201ENST00000285383 730 ntBASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MFAP1P1-201ENST00000442257 1255 ntBASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 CA15P1-201ENST00000481698 905 ntBASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AP003071.4-201ENST00000562276 1284 ntBASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV7-1A0A0A6YYK4 AC093503.3-201ENST00000624917 2352 ntBASIC14.65□□□□□ -0.07
TRBV7-1A0A0A6YYK4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRBV7-1A0A0A6YYK4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV7-1A0A0A6YYK4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms