Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TRAV30A0A087WSZ9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 AC083906.6-201ENST00000641366 219 ntBASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV30A0A087WSZ9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 AC026366.1-201ENST00000488803 879 ntBASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 AC008403.3-201ENST00000598924 454 ntBASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 HLA-A-209ENST00000638375 975 ntBASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 AC079598.2-202ENST00000546624 1451 ntBASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV30A0A087WSZ9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 PKD1P1-201ENST00000458669 6805 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 KRT16P5-201ENST00000455284 522 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 RNA5SP413-201ENST00000516373 109 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 MTDHP1-201ENST00000605323 784 ntBASIC14.81□□□□□ -0.04
TRAV30A0A087WSZ9 AC069544.1-201ENST00000609399 999 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms