Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD18A-201ENST00000363753 72 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 RNU6-1065P-201ENST00000384513 106 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 Z96811.1-201ENST00000445880 108 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR432-201ENST00000606207 94 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6773-201ENST00000612812 74 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 MTRNR2L9-201ENST00000622562 75 ntBASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-2Q9BYR7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 AL022322.2-201ENST00000624072 20397 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 RNA5SP510-201ENST00000364697 99 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR7-3-201ENST00000384898 110 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR1827-201ENST00000408549 66 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 AC006210.1-201ENST00000424882 111 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD57-201ENST00000448188 72 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 SCARNA22-201ENST00000503991 125 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD63.2-201ENST00000516303 64 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6071-201ENST00000616741 78 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6837-201ENST00000620884 64 ntBASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-2Q9BYR7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR20A-201ENST00000362279 71 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 RNA5SP306-201ENST00000411087 107 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORA74C-2-201ENST00000411179 201 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 ABCF2P2-201ENST00000450549 296 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 RNU7-21P-201ENST00000459430 62 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6737-201ENST00000617385 70 ntBASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP3-2Q9BYR7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD110-201ENST00000408189 75 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 SCARNA16.5-201ENST00000517114 183 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD95-201ENST00000579879 68 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR4271-201ENST00000582451 67 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR4658-201ENST00000584344 65 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 AL391358.1-201ENST00000605342 190 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6780B-201ENST00000610307 79 ntBASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-2Q9BYR7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR3074-201ENST00000384885 81 ntBASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 AC140172.1-201ENST00000502928 141 ntBASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 RNU6-1110P-201ENST00000516462 101 ntBASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-2Q9BYR7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 SNORD66.1-201ENST00000391230 76 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR1911-201ENST00000410783 80 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 RNU7-90P-201ENST00000459216 62 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 RN7SL649P-201ENST00000496974 275 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 RNA5SP362-201ENST00000516048 118 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR3200-201ENST00000580767 85 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 MIR6891-201ENST00000618788 93 ntBASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-2Q9BYR7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP3-2Q9BYR7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP3-2Q9BYR7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 287.7 ms