Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR588-201ENST00000384900 83 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 MIR520C-201ENST00000385005 87 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 HMGN2P35-201ENST00000412164 270 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VARS2Q5ST30 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VARS2Q5ST30 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
VARS2Q5ST30 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VARS2Q5ST30 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VARS2Q5ST30 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VARS2Q5ST30 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
VARS2Q5ST30 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARS2Q5ST30 RNU6-668P-201ENST00000364180 107 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 RNU6-654P-201ENST00000364373 107 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 SCARNA21.1-201ENST00000515996 128 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 MIR3920-201ENST00000581751 86 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 MIR4435-1-201ENST00000582552 80 ntBASIC3.31□□□□□ -1.88
VARS2Q5ST30 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
VARS2Q5ST30 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VARS2Q5ST30 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.3□□□□□ -1.88
VARS2Q5ST30 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 AC104389.3-201ENST00000445629 235 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 MTND4LP1-201ENST00000446263 157 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 RNU6-237P-201ENST00000515985 71 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 MTRNR2L2-201ENST00000604882 87 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.3□□□□□ -1.88
VARS2Q5ST30 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VARS2Q5ST30 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VARS2Q5ST30 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VARS2Q5ST30 MIR30D-201ENST00000362283 70 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 RNU6-461P-201ENST00000364195 107 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 MIR519A1-201ENST00000385257 85 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 RNU6-220P-201ENST00000390919 107 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 RNU7-195P-201ENST00000458793 62 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 RNU6-274P-201ENST00000459566 107 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 AC099513.1-201ENST00000490423 301 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 GTF3AP2-201ENST00000557014 266 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 MIR3938-201ENST00000582157 103 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 AC007318.2-201ENST00000620999 243 ntBASIC3.29□□□□□ -1.88
VARS2Q5ST30 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VARS2Q5ST30 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
VARS2Q5ST30 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VARS2Q5ST30 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VARS2Q5ST30 RNU1-58P-201ENST00000362413 163 ntBASIC3.28□□□□□ -1.88
VARS2Q5ST30 Y_RNA.379-201ENST00000365653 102 ntBASIC3.28□□□□□ -1.88
VARS2Q5ST30 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
VARS2Q5ST30 RNU6-531P-201ENST00000516694 104 ntBASIC3.28□□□□□ -1.88
VARS2Q5ST30 U6.100-201ENST00000636230 99 ntBASIC3.28□□□□□ -1.88
VARS2Q5ST30 MIR22-201ENST00000362190 85 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VARS2Q5ST30 AC244098.3-201ENST00000424803 96 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 SNORA9.3-201ENST00000516383 129 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VARS2Q5ST30 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
VARS2Q5ST30 MIR4773-1-201ENST00000637203 78 ntBASIC3.27□□□□□ -1.89
VARS2Q5ST30 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
VARS2Q5ST30 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VARS2Q5ST30 RNU4-58P-201ENST00000363192 141 ntBASIC3.26□□□□□ -1.89
VARS2Q5ST30 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
VARS2Q5ST30 AC009474.2-201ENST00000451383 136 ntBASIC3.26□□□□□ -1.89
VARS2Q5ST30 TRAJ51-201ENST00000504127 63 ntBASIC3.26□□□□□ -1.89
VARS2Q5ST30 SUB1P4-201ENST00000566062 339 ntBASIC3.26□□□□□ -1.89
VARS2Q5ST30 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VARS2Q5ST30 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VARS2Q5ST30 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VARS2Q5ST30 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNU6-1260P-201ENST00000362944 107 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 U8.13-201ENST00000390842 128 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNU6-1177P-201ENST00000391058 104 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNU6-935P-201ENST00000410371 100 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNU6-122P-201ENST00000516818 107 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNA5SP137-201ENST00000516833 135 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 RNU6-711P-201ENST00000517255 106 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 MIR6740-201ENST00000618268 113 ntBASIC3.25□□□□□ -1.89
VARS2Q5ST30 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VARS2Q5ST30 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VARS2Q5ST30 MIR424-201ENST00000362227 98 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 RNU6-382P-201ENST00000365181 106 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 RNU6-1052P-201ENST00000411398 104 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 AL139132.1-201ENST00000431587 344 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.24□□□□□ -1.89
VARS2Q5ST30 RNU7-41P-201ENST00000515917 61 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 RNU6-719P-201ENST00000516671 104 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 MIR4709-201ENST00000577272 72 ntBASIC3.24□□□□□ -1.89
VARS2Q5ST30 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VARS2Q5ST30 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VARS2Q5ST30 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
VARS2Q5ST30 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VARS2Q5ST30 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VARS2Q5ST30 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
VARS2Q5ST30 Y_RNA.258-201ENST00000364613 105 ntBASIC3.23□□□□□ -1.89
VARS2Q5ST30 Y_RNA.536-201ENST00000384621 113 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms