RNA–Protein interactions for RNA: ENST00000411398.1

RNU6-1052P-201, Transcript of RNA, U6 small nuclear 1052, pseudogene, humanhuman

BASIC

Gene RNU6-1052P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1052P-201ENST00000411398 AEBP2Q6ZN18 517 aaPredicted RBP7.6□□□□□ -1.19
RNU6-1052P-201ENST00000411398 CHIC1Q5VXU3 224 aa7.3□□□□□ -1.24
RNU6-1052P-201ENST00000411398 SENP3Q9H4L4 574 aaPredicted RBP6.72□□□□□ -1.33
RNU6-1052P-201ENST00000411398 POTEDQ86YR6 584 aa6.6□□□□□ -1.35
RNU6-1052P-201ENST00000411398 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
RNU6-1052P-201ENST00000411398 FOXD1Q16676 465 aa6.2□□□□□ -1.42
RNU6-1052P-201ENST00000411398 MSH5O43196 834 aa6.1□□□□□ -1.43
RNU6-1052P-201ENST00000411398 PIAS4Q8N2W9 510 aaPredicted RBP5.71□□□□□ -1.5
RNU6-1052P-201ENST00000411398 PLPPR3Q6T4P5 718 aa5.46□□□□□ -1.54
RNU6-1052P-201ENST00000411398 PPP6R1Q9UPN7 881 aa5.45□□□□□ -1.54
RNU6-1052P-201ENST00000411398 ADRA2BP18089 450 aa5.41□□□□□ -1.54
RNU6-1052P-201ENST00000411398 CACNB1Q02641 598 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1052P-201ENST00000411398 DMRT2Q9Y5R5 561 aa5.23□□□□□ -1.57
RNU6-1052P-201ENST00000411398 SCAF1Q9H7N4 1312 aaKnown RBP5.21□□□□□ -1.58
RNU6-1052P-201ENST00000411398 C1QBPQ07021 282 aaKnown RBP5.08□□□□□ -1.6
RNU6-1052P-201ENST00000411398 RNF39Q9H2S5 420 aa5.08□□□□□ -1.6
RNU6-1052P-201ENST00000411398 MAPK8IP2Q13387 824 aaPredicted RBP5.07□□□□□ -1.6
RNU6-1052P-201ENST00000411398 POTEHQ6S545 545 aa5.02□□□□□ -1.61
RNU6-1052P-201ENST00000411398 DNAJC5BQ9UF47 199 aa4.98□□□□□ -1.61
RNU6-1052P-201ENST00000411398 DCAF8L1A6NGE4 600 aa4.97□□□□□ -1.61
RNU6-1052P-201ENST00000411398 HOXD11P31277 338 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1052P-201ENST00000411398 RNF216Q9NWF9 866 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1052P-201ENST00000411398 CNKSR2Q8WXI2 1034 aa4.75□□□□□ -1.65
RNU6-1052P-201ENST00000411398 PPP4R3CPQ6ZMV5 832 aa4.68□□□□□ -1.66
RNU6-1052P-201ENST00000411398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNU6-1052P-201ENST00000411398 DSG3P32926 999 aa4.62□□□□□ -1.67
RNU6-1052P-201ENST00000411398 CAPN15O75808 1086 aa4.55□□□□□ -1.68
RNU6-1052P-201ENST00000411398 RBM42Q9BTD8 480 aaKnown RBP4.55□□□□□ -1.68
RNU6-1052P-201ENST00000411398 SP7Q8TDD2 431 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1052P-201ENST00000411398 APLP2Q06481 763 aa4.53□□□□□ -1.68
RNU6-1052P-201ENST00000411398 NCBP3Q53F19 620 aaKnown RBP4.51□□□□□ -1.69
RNU6-1052P-201ENST00000411398 CHRDL2Q6WN34 429 aa4.48□□□□□ -1.69
RNU6-1052P-201ENST00000411398 ZNF219Q9P2Y4 722 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1052P-201ENST00000411398 SPINK5Q9NQ38 1064 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1052P-201ENST00000411398 U3KPZ7 1027 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1052P-201ENST00000411398 PLSCR2Q9NRY7 297 aa4.44□□□□□ -1.7
RNU6-1052P-201ENST00000411398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1052P-201ENST00000411398 HNRNPUL2Q1KMD3 747 aaKnown RBP4.4□□□□□ -1.71
RNU6-1052P-201ENST00000411398 TRHP20396 242 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1052P-201ENST00000411398 HAX1O00165 279 aa4.33□□□□□ -1.72
RNU6-1052P-201ENST00000411398 AKT1S1Q96B36 256 aa4.33□□□□□ -1.72
RNU6-1052P-201ENST00000411398 ABCB7O75027 752 aa4.32□□□□□ -1.72
RNU6-1052P-201ENST00000411398 SAMD1Q6SPF0 538 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1052P-201ENST00000411398 NPM3O75607 178 aaKnown RBP4.27□□□□□ -1.73
RNU6-1052P-201ENST00000411398 LHX8Q68G74 356 aa4.26□□□□□ -1.73
RNU6-1052P-201ENST00000411398 PIP4P2Q8N4L2 257 aa4.26□□□□□ -1.73
RNU6-1052P-201ENST00000411398 FXR2P51116 673 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-1052P-201ENST00000411398 ZBTB12Q9Y330 459 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1052P-201ENST00000411398 REM2Q8IYK8 340 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1052P-201ENST00000411398 CLCN6P51797 869 aa4.18□□□□□ -1.74
RNU6-1052P-201ENST00000411398 POLA2Q14181 598 aa4.18□□□□□ -1.74
RNU6-1052P-201ENST00000411398 PCDH10Q9P2E7 1040 aa4.17□□□□□ -1.74
RNU6-1052P-201ENST00000411398 SLC4A2P04920 1241 aa4.15□□□□□ -1.75
RNU6-1052P-201ENST00000411398 GABBR2O75899 941 aa4.12□□□□□ -1.75
RNU6-1052P-201ENST00000411398 EVX2Q03828 476 aa4.12□□□□□ -1.75
RNU6-1052P-201ENST00000411398 PITPNM1O00562 1244 aa4.11□□□□□ -1.75
RNU6-1052P-201ENST00000411398 C19orf67A6NJJ6 358 aa4.1□□□□□ -1.75
RNU6-1052P-201ENST00000411398 MYCNP04198 464 aaPredicted RBP4.05□□□□□ -1.76
RNU6-1052P-201ENST00000411398 PRKAR2AP13861 404 aaKnown RBP4.04□□□□□ -1.76
RNU6-1052P-201ENST00000411398 SPDYE1Q8NFV5 336 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1052P-201ENST00000411398 SPDYE2BA6NHP3 402 aa4□□□□□ -1.77
RNU6-1052P-201ENST00000411398 POTEMA6NI47 508 aa4□□□□□ -1.77
RNU6-1052P-201ENST00000411398 SPDYE6P0CI01 402 aa4□□□□□ -1.77
RNU6-1052P-201ENST00000411398 SPDYE2Q495Y8 402 aa4□□□□□ -1.77
RNU6-1052P-201ENST00000411398 OSCARQ8IYS5 282 aa3.98□□□□□ -1.77
RNU6-1052P-201ENST00000411398 DCBLD2Q96PD2 775 aa3.98□□□□□ -1.77
RNU6-1052P-201ENST00000411398 POTEGQ6S5H5 508 aa3.97□□□□□ -1.77
RNU6-1052P-201ENST00000411398 POTEIP0CG38 1075 aa3.95□□□□□ -1.78
RNU6-1052P-201ENST00000411398 CLEC11AQ9Y240 323 aa3.94□□□□□ -1.78
RNU6-1052P-201ENST00000411398 OTUD5Q96G74 571 aa3.92□□□□□ -1.78
RNU6-1052P-201ENST00000411398 FBLN2P98095 1184 aa3.9□□□□□ -1.79
RNU6-1052P-201ENST00000411398 MAMSTRQ6ZN01 415 aa3.9□□□□□ -1.79
RNU6-1052P-201ENST00000411398 PRR29P0C7W0 189 aa3.89□□□□□ -1.79
RNU6-1052P-201ENST00000411398 CD44P16070 742 aaKnown RBP3.89□□□□□ -1.79
RNU6-1052P-201ENST00000411398 ZNF579Q8NAF0 562 aaKnown RBP3.85□□□□□ -1.79
RNU6-1052P-201ENST00000411398 CHADLQ6NUI6 762 aa3.84□□□□□ -1.79
RNU6-1052P-201ENST00000411398 ZNF692Q9BU19 519 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1052P-201ENST00000411398 SSUH2Q9Y2M2 353 aa3.84□□□□□ -1.79
RNU6-1052P-201ENST00000411398 FARP1Q9Y4F1 1045 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1052P-201ENST00000411398 ATXN8OSP0DMR3 200 aa3.81□□□□□ -1.8
RNU6-1052P-201ENST00000411398 ATF5Q9Y2D1 282 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1052P-201ENST00000411398 C7P10643 843 aa3.8□□□□□ -1.8
RNU6-1052P-201ENST00000411398 KCNA4P22459 653 aa3.8□□□□□ -1.8
RNU6-1052P-201ENST00000411398 POTEB2H3BUK9 544 aa3.79□□□□□ -1.8
RNU6-1052P-201ENST00000411398 FAM163AQ96GL9 167 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1052P-201ENST00000411398 SCUBE2Q9NQ36 999 aa3.79□□□□□ -1.8
RNU6-1052P-201ENST00000411398 PAK3O75914 559 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1052P-201ENST00000411398 SLC39A7Q92504 469 aa3.78□□□□□ -1.8
RNU6-1052P-201ENST00000411398 ZRANB1Q9UGI0 708 aa3.78□□□□□ -1.8
RNU6-1052P-201ENST00000411398 CDAN1Q8IWY9 1227 aa3.77□□□□□ -1.81
RNU6-1052P-201ENST00000411398 FOXD4L1Q9NU39 408 aa3.77□□□□□ -1.81
RNU6-1052P-201ENST00000411398 GALR2O43603 387 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1052P-201ENST00000411398 ASTLQ6HA08 431 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1052P-201ENST00000411398 PABPN1Q86U42 306 aaKnown RBP eCLIP3.73□□□□□ -1.81
RNU6-1052P-201ENST00000411398 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1052P-201ENST00000411398 STAG3Q9UJ98 1225 aa3.72□□□□□ -1.81
RNU6-1052P-201ENST00000411398 METRNQ9UJH8 293 aa3.72□□□□□ -1.81
RNU6-1052P-201ENST00000411398 NPM1P06748 294 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU6-1052P-201ENST00000411398 MMRN1Q13201 1228 aa3.7□□□□□ -1.82
RNU6-1052P-201ENST00000411398 ATMINO43313 823 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms