Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.46□□□□□ -2.01
KRTAP3-3Q9BYR6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
KRTAP3-3Q9BYR6 AL138820.1-201ENST00000617901 5305 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 SNORD111B-201ENST00000408587 80 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 SNORA77-201ENST00000408716 125 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 RPS12P10-201ENST00000427031 377 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 JTBP1-201ENST00000441314 247 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 RN7SL443P-201ENST00000464331 290 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR3664-201ENST00000579074 99 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR6780B-201ENST00000610307 79 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR8080-201ENST00000622224 89 ntBASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.46□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 Y_RNA.206-201ENST00000364136 102 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP428-201ENST00000365129 132 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU6-458P-201ENST00000384179 107 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU1-119P-201ENST00000391122 165 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RN7SKP286-201ENST00000410894 299 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 SDHDP6-201ENST00000414693 480 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 AL591806.2-201ENST00000433122 173 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RPS29P9-201ENST00000440360 171 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RN7SL517P-201ENST00000462240 305 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU7-40P-201ENST00000516397 64 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 AC036111.3-201ENST00000526389 112 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR548AG1-201ENST00000579932 66 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP440-201ENST00000612665 119 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 U6.58-201ENST00000613107 107 ntBASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.45□□□□□ -2.02
KRTAP3-3Q9BYR6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP183-201ENST00000362452 119 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP284-201ENST00000384547 118 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR1255B2-201ENST00000408618 67 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR1289-1-201ENST00000408836 144 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 AC108751.2-201ENST00000469993 231 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 RN7SL214P-201ENST00000487317 265 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 AC012493.3-201ENST00000604494 112 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR6071-201ENST00000616741 78 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 AL022311.1-201ENST00000623726 19416 ntBASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-3Q9BYR6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 AL031595.2-201ENST00000624215 19071 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR600-201ENST00000385007 98 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU6-1326P-201ENST00000391262 107 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 IFITM8P-201ENST00000522529 394 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR4804-201ENST00000581683 73 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR4271-201ENST00000582451 67 ntBASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-3Q9BYR6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 AC112198.2-201ENST00000426589 6996 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms