Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-518P-201ENST00000516056 96 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 RNU6-947P-201ENST00000516264 106 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 SNORA67.7-201ENST00000516664 135 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 SNORA43.3-201ENST00000517240 103 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-3Q9BYR6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 Y_RNA.69-201ENST00000362885 109 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 RN7SL612P-201ENST00000497704 295 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 RNA5SP73-201ENST00000516744 108 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 SNORA31.17-201ENST00000516953 127 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 CYP3A54P-201ENST00000566950 75 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 AL359091.2-201ENST00000609303 556 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 MIR6806-201ENST00000622141 64 ntBASIC2.59□□□□□ -1.99
KRTAP3-3Q9BYR6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-3Q9BYR6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -2
KRTAP3-3Q9BYR6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-3Q9BYR6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-3Q9BYR6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-3Q9BYR6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 AC080100.1-201ENST00000624239 5356 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 SPRR2C-201ENST00000290702 219 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 Y_RNA.174-201ENST00000363781 105 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RNA5SP435-201ENST00000364044 108 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RNU6-1008P-201ENST00000384160 104 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RNU1-148P-201ENST00000384472 162 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 MIR329-2-201ENST00000385029 84 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RPL23AP27-201ENST00000415161 451 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 RN7SL273P-201ENST00000481561 299 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 U3.45-201ENST00000607547 219 ntBASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-3Q9BYR6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 HLA-DPA3-207ENST00000454398 229 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 ACA64.1-201ENST00000459171 127 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RNU6-513P-201ENST00000516104 104 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 SCARNA16.4-201ENST00000516956 187 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RNA5SP373-201ENST00000517271 95 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 AP001052.1-201ENST00000626421 99 ntBASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP3-3Q9BYR6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 RNU1-132P-201ENST00000364300 164 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 MIR938-201ENST00000401216 83 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 RN7SL72P-201ENST00000460697 269 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SNORA31.2-201ENST00000516019 134 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SNORA31.14-201ENST00000516728 116 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 CU639417.4-201ENST00000623928 207 ntBASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms