RNA–Protein interactions for RNA: ENST00000516056.1

RNU6-518P-201, Transcript of RNA, U6 small nuclear 518, pseudogene, humanhuman

BASIC

Gene RNU6-518P, Length 96 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-518P-201ENST00000516056 AEBP2Q6ZN18 517 aaPredicted RBP5.6□□□□□ -1.51
RNU6-518P-201ENST00000516056 POTEDQ86YR6 584 aa5.3□□□□□ -1.56
RNU6-518P-201ENST00000516056 CHIC1Q5VXU3 224 aa5.27□□□□□ -1.57
RNU6-518P-201ENST00000516056 SENP3Q9H4L4 574 aaPredicted RBP4.92□□□□□ -1.62
RNU6-518P-201ENST00000516056 PHF23Q9BUL5 403 aaPredicted RBP4.73□□□□□ -1.65
RNU6-518P-201ENST00000516056 FOXD1Q16676 465 aa4.6□□□□□ -1.67
RNU6-518P-201ENST00000516056 MSH5O43196 834 aa4.57□□□□□ -1.68
RNU6-518P-201ENST00000516056 CACNB1Q02641 598 aaPredicted RBP4.18□□□□□ -1.74
RNU6-518P-201ENST00000516056 PIAS4Q8N2W9 510 aaPredicted RBP4.18□□□□□ -1.74
RNU6-518P-201ENST00000516056 POTEHQ6S545 545 aa4.07□□□□□ -1.76
RNU6-518P-201ENST00000516056 PPP6R1Q9UPN7 881 aa3.87□□□□□ -1.79
RNU6-518P-201ENST00000516056 RNF39Q9H2S5 420 aa3.83□□□□□ -1.8
RNU6-518P-201ENST00000516056 ADRA2BP18089 450 aa3.81□□□□□ -1.8
RNU6-518P-201ENST00000516056 DMRT2Q9Y5R5 561 aa3.81□□□□□ -1.8
RNU6-518P-201ENST00000516056 C1QBPQ07021 282 aaKnown RBP3.76□□□□□ -1.81
RNU6-518P-201ENST00000516056 MAPK8IP2Q13387 824 aaPredicted RBP3.65□□□□□ -1.83
RNU6-518P-201ENST00000516056 PLPPR3Q6T4P5 718 aa3.64□□□□□ -1.83
RNU6-518P-201ENST00000516056 DCAF8L1A6NGE4 600 aa3.61□□□□□ -1.83
RNU6-518P-201ENST00000516056 SP7Q8TDD2 431 aaPredicted RBP3.57□□□□□ -1.84
RNU6-518P-201ENST00000516056 SCAF1Q9H7N4 1312 aaKnown RBP3.56□□□□□ -1.84
RNU6-518P-201ENST00000516056 DNAJC5BQ9UF47 199 aa3.52□□□□□ -1.85
RNU6-518P-201ENST00000516056 PLSCR2Q9NRY7 297 aa3.51□□□□□ -1.85
RNU6-518P-201ENST00000516056 HOXD11P31277 338 aaPredicted RBP3.46□□□□□ -1.86
RNU6-518P-201ENST00000516056 DSG3P32926 999 aa3.39□□□□□ -1.87
RNU6-518P-201ENST00000516056 CHRDL2Q6WN34 429 aa3.39□□□□□ -1.87
RNU6-518P-201ENST00000516056 LHX8Q68G74 356 aa3.32□□□□□ -1.88
RNU6-518P-201ENST00000516056 RNF216Q9NWF9 866 aaPredicted RBP3.3□□□□□ -1.88
RNU6-518P-201ENST00000516056 RBM42Q9BTD8 480 aaKnown RBP3.29□□□□□ -1.88
RNU6-518P-201ENST00000516056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU6-518P-201ENST00000516056 HAX1O00165 279 aa3.25□□□□□ -1.89
RNU6-518P-201ENST00000516056 CAPN15O75808 1086 aa3.25□□□□□ -1.89
RNU6-518P-201ENST00000516056 SPINK5Q9NQ38 1064 aaPredicted RBP3.23□□□□□ -1.89
RNU6-518P-201ENST00000516056 PCDH10Q9P2E7 1040 aa3.2□□□□□ -1.9
RNU6-518P-201ENST00000516056 PIP4P2Q8N4L2 257 aa3.18□□□□□ -1.9
RNU6-518P-201ENST00000516056 CNKSR2Q8WXI2 1034 aa3.18□□□□□ -1.9
RNU6-518P-201ENST00000516056 POTEMA6NI47 508 aa3.16□□□□□ -1.9
RNU6-518P-201ENST00000516056 EVX2Q03828 476 aa3.14□□□□□ -1.91
RNU6-518P-201ENST00000516056 U3KPZ7 1027 aaPredicted RBP3.14□□□□□ -1.91
RNU6-518P-201ENST00000516056 POTEGQ6S5H5 508 aa3.12□□□□□ -1.91
RNU6-518P-201ENST00000516056 ABCB7O75027 752 aa3.11□□□□□ -1.91
RNU6-518P-201ENST00000516056 ZNF219Q9P2Y4 722 aaPredicted RBP3.11□□□□□ -1.91
RNU6-518P-201ENST00000516056 FXR2P51116 673 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-518P-201ENST00000516056 AKT1S1Q96B36 256 aa3.09□□□□□ -1.91
RNU6-518P-201ENST00000516056 PPP4R3CPQ6ZMV5 832 aa3.08□□□□□ -1.92
RNU6-518P-201ENST00000516056 GABBR2O75899 941 aa3.07□□□□□ -1.92
RNU6-518P-201ENST00000516056 TRHP20396 242 aaPredicted RBP3.06□□□□□ -1.92
RNU6-518P-201ENST00000516056 APLP2Q06481 763 aa3.05□□□□□ -1.92
RNU6-518P-201ENST00000516056 REM2Q8IYK8 340 aaPredicted RBP3.03□□□□□ -1.92
RNU6-518P-201ENST00000516056 C19orf67A6NJJ6 358 aa3.02□□□□□ -1.93
RNU6-518P-201ENST00000516056 OTUD5Q96G74 571 aa3.01□□□□□ -1.93
RNU6-518P-201ENST00000516056 PITPNM1O00562 1244 aa3□□□□□ -1.93
RNU6-518P-201ENST00000516056 POTEIP0CG38 1075 aa3□□□□□ -1.93
RNU6-518P-201ENST00000516056 CLCN6P51797 869 aa2.94□□□□□ -1.94
RNU6-518P-201ENST00000516056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.93□□□□□ -1.94
RNU6-518P-201ENST00000516056 HNRNPUL2Q1KMD3 747 aaKnown RBP2.93□□□□□ -1.94
RNU6-518P-201ENST00000516056 LCE2DQ5TA82 110 aaPredicted RBP2.92□□□□□ -1.94
RNU6-518P-201ENST00000516056 PRKAR2AP13861 404 aaKnown RBP2.9□□□□□ -1.95
RNU6-518P-201ENST00000516056 DCBLD2Q96PD2 775 aa2.89□□□□□ -1.95
RNU6-518P-201ENST00000516056 POTEB2H3BUK9 544 aa2.88□□□□□ -1.95
RNU6-518P-201ENST00000516056 MMRN1Q13201 1228 aa2.88□□□□□ -1.95
RNU6-518P-201ENST00000516056 POLA2Q14181 598 aa2.87□□□□□ -1.95
RNU6-518P-201ENST00000516056 SAMD1Q6SPF0 538 aaPredicted RBP2.87□□□□□ -1.95
RNU6-518P-201ENST00000516056 CDAN1Q8IWY9 1227 aa2.87□□□□□ -1.95
RNU6-518P-201ENST00000516056 ZBTB12Q9Y330 459 aaPredicted RBP2.85□□□□□ -1.95
RNU6-518P-201ENST00000516056 NCBP3Q53F19 620 aaKnown RBP2.84□□□□□ -1.95
RNU6-518P-201ENST00000516056 FAM163AQ96GL9 167 aaPredicted RBP2.83□□□□□ -1.96
RNU6-518P-201ENST00000516056 MAMSTRQ6ZN01 415 aa2.82□□□□□ -1.96
RNU6-518P-201ENST00000516056 SPNS2Q8IVW8 549 aa2.82□□□□□ -1.96
RNU6-518P-201ENST00000516056 OSCARQ8IYS5 282 aa2.82□□□□□ -1.96
RNU6-518P-201ENST00000516056 CD44P16070 742 aaKnown RBP2.79□□□□□ -1.96
RNU6-518P-201ENST00000516056 NPM3O75607 178 aaKnown RBP2.77□□□□□ -1.97
RNU6-518P-201ENST00000516056 SLC4A2P04920 1241 aa2.77□□□□□ -1.97
RNU6-518P-201ENST00000516056 SPDYE1Q8NFV5 336 aaPredicted RBP2.77□□□□□ -1.97
RNU6-518P-201ENST00000516056 POTEJP0CG39 1038 aa2.76□□□□□ -1.97
RNU6-518P-201ENST00000516056 ZNF579Q8NAF0 562 aaKnown RBP2.76□□□□□ -1.97
RNU6-518P-201ENST00000516056 SCUBE2Q9NQ36 999 aa2.76□□□□□ -1.97
RNU6-518P-201ENST00000516056 CHADLQ6NUI6 762 aa2.73□□□□□ -1.97
RNU6-518P-201ENST00000516056 CLEC11AQ9Y240 323 aa2.73□□□□□ -1.97
RNU6-518P-201ENST00000516056 GALR2O43603 387 aaPredicted RBP2.72□□□□□ -1.97
RNU6-518P-201ENST00000516056 METRNQ9UJH8 293 aa2.72□□□□□ -1.97
RNU6-518P-201ENST00000516056 SPDYE2BA6NHP3 402 aa2.7□□□□□ -1.98
RNU6-518P-201ENST00000516056 SPDYE6P0CI01 402 aa2.7□□□□□ -1.98
RNU6-518P-201ENST00000516056 C7P10643 843 aa2.7□□□□□ -1.98
RNU6-518P-201ENST00000516056 SPDYE2Q495Y8 402 aa2.7□□□□□ -1.98
RNU6-518P-201ENST00000516056 SLC39A7Q92504 469 aa2.7□□□□□ -1.98
RNU6-518P-201ENST00000516056 PELP1Q8IZL8 1130 aaKnown RBP2.69□□□□□ -1.98
RNU6-518P-201ENST00000516056 FARP1Q9Y4F1 1045 aaPredicted RBP2.68□□□□□ -1.98
RNU6-518P-201ENST00000516056 ST18O60284 1047 aa2.67□□□□□ -1.98
RNU6-518P-201ENST00000516056 ASTLQ6HA08 431 aaPredicted RBP2.67□□□□□ -1.98
RNU6-518P-201ENST00000516056 TMEM121BQ9BXQ6 578 aaPredicted RBP2.66□□□□□ -1.98
RNU6-518P-201ENST00000516056 ZRANB1Q9UGI0 708 aa2.65□□□□□ -1.99
RNU6-518P-201ENST00000516056 PRR29P0C7W0 189 aa2.64□□□□□ -1.99
RNU6-518P-201ENST00000516056 ATMINO43313 823 aaPredicted RBP2.62□□□□□ -1.99
RNU6-518P-201ENST00000516056 MYCNP04198 464 aaPredicted RBP2.61□□□□□ -1.99
RNU6-518P-201ENST00000516056 KRTAP3-3Q9BYR6 98 aa2.6□□□□□ -1.99
RNU6-518P-201ENST00000516056 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
RNU6-518P-201ENST00000516056 SSUH2Q9Y2M2 353 aa2.6□□□□□ -1.99
RNU6-518P-201ENST00000516056 RNF166Q96A37 237 aaPredicted RBP2.58□□□□□ -2
RNU6-518P-201ENST00000516056 ATF5Q9Y2D1 282 aaPredicted RBP2.58□□□□□ -2
RNU6-518P-201ENST00000516056 POTEFA5A3E0 1075 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms