Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 AL031602.1-201ENST00000633169 911 ntBASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC01558Q9Y6Z2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 RP9P-202ENST00000450133 1212 ntBASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 LINC02228-204ENST00000642115 2962 ntBASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC01558Q9Y6Z2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ANO7L1-203ENST00000602586 1720 ntBASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LINC01558Q9Y6Z2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms