Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP4S1Q9Y587 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 AC131212.1-201ENST00000613771 668 ntBASIC17.85■□□□□ 0.45
AP4S1Q9Y587 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP4S1Q9Y587 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PKD1P1-201ENST00000458669 6805 ntBASIC17.84■□□□□ 0.45
AP4S1Q9Y587 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AC142381.2-201ENST00000566120 298 ntBASIC17.84■□□□□ 0.45
AP4S1Q9Y587 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 AC009053.2-201ENST00000563701 2365 ntBASIC17.84■□□□□ 0.45
AP4S1Q9Y587 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4S1Q9Y587 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 AC099398.1-201ENST00000567919 2776 ntBASIC17.83■□□□□ 0.45
AP4S1Q9Y587 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4S1Q9Y587 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 AL355472.2-201ENST00000422958 438 ntBASIC17.83■□□□□ 0.44
AP4S1Q9Y587 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms