Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE7Q9UBL6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.33■□□□□ 0.52
CPNE7Q9UBL6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE7Q9UBL6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE7Q9UBL6 AL032819.2-201ENST00000624543 2162 ntBASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 AC007952.6-201ENST00000573168 2673 ntBASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 AC003957.1-201ENST00000625108 2673 ntBASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE7Q9UBL6 FP475955.4-201ENST00000623131 1990 ntBASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE7Q9UBL6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 AC036111.1-201ENST00000533973 1582 ntBASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE7Q9UBL6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE7Q9UBL6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms