Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 CR769767.2-201ENST00000622735 460 ntBASIC17.34■□□□□ 0.37
LRFN1Q9P244 MYC-208ENST00000641036 567 ntBASIC17.34■□□□□ 0.37
LRFN1Q9P244 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
LRFN1Q9P244 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN1Q9P244 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 AL359075.1-203ENST00000462729 1002 ntBASIC17.33■□□□□ 0.36
LRFN1Q9P244 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN1Q9P244 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRFN1Q9P244 GPAT2P1-201ENST00000444924 1672 ntBASIC17.32■□□□□ 0.36
LRFN1Q9P244 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 AL031133.1-201ENST00000406807 723 ntBASIC17.32■□□□□ 0.36
LRFN1Q9P244 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRFN1Q9P244 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN1Q9P244 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRFN1Q9P244 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN1Q9P244 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms