Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBP1Q9NZI7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
UBP1Q9NZI7 PRSS44-201ENST00000515154 1146 ntBASIC19.23■□□□□ 0.67
UBP1Q9NZI7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 AP006294.2-201ENST00000641667 209 ntBASIC19.23■□□□□ 0.67
UBP1Q9NZI7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
UBP1Q9NZI7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MIR718-201ENST00000390190 70 ntBASIC19.22■□□□□ 0.67
UBP1Q9NZI7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 AP003071.4-201ENST00000562276 1284 ntBASIC19.22■□□□□ 0.67
UBP1Q9NZI7 CKBP1-201ENST00000565489 1086 ntBASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBP1Q9NZI7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 SNORA78-201ENST00000459373 127 ntBASIC19.21■□□□□ 0.67
UBP1Q9NZI7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.21■□□□□ 0.67
UBP1Q9NZI7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 AP000692.2-201ENST00000608391 879 ntBASIC19.21■□□□□ 0.67
UBP1Q9NZI7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms