Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 AL121906.2-201ENST00000621597 723 ntBASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCAL1Q9NZC9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.89■□□□□ 0.78
SMARCAL1Q9NZC9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCAL1Q9NZC9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 AC097658.1-201ENST00000475555 843 ntBASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCAL1Q9NZC9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC012313.1-201ENST00000593393 3059 ntBASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC142086.2-201ENST00000569753 217 ntBASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 AC133041.1-202ENST00000642053 222 ntBASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCAL1Q9NZC9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 AC069152.1-201ENST00000438030 544 ntBASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCAL1Q9NZC9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms